Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015870881.1_cds_XP_016434265.1_30342
CDS Infomation

[gene=LOC107760688] [db_xref=GeneID:107760688] [protein=pentatricopeptide repeat-containing protein At1g77405-like] [protein_id=XP_016434265.1] [location=185709..187052] [gbkey=CDS]
Sequence

ATGTTCTCATCAAGATCACTTTCTTCTCCTAATTTTACCCAAAACCTTCTGATAAACCAA
GTTTTAGCTGCAATTATCCGAAATCGAAATCGGCCGTTTGAGACAAATGTCGCAGCCTCA
ATTCCCAAGCAACCCATTTGGACTGTAGAAGCAGTTTCTCAAGTCTTAAGATCAATCCCC
AGATACCTCTTTCAATCCCCAAGATCCATTGGCCGCCAAAGTGGGTTTCGCCACCGTACC
CCATTAAAGCAAAGAAACCTAAGAGAAGAATTCCATAAGGCCCGAAAAGGGGTACTCATT
CTTGGCCCAACTGCTCATAGAGATCCTCAAAATGTACAGCTAGGTGTTGACAAAGCACTA
GAATTTTTCCATTGGGTTGAGACTCATTGTGGGTTTACTCACAATGAGCTCACGTGTAAG
GAGATGTCTCTTGTTCTTGCTAAAGGGGGTTGTAAACTGAAACTCATTTGGGAATTTCTC
AAACAAATGTCAAGAAAAGGGCTCGTTACCACACCGACCGTCACCTGTTTGATAAAATGC
CTTGGAGAAGAAGGGTTAGTGGAAGAAGCATTGGCTACCTTTTATAGAATGAAACGGTTT
CACTGTAAGCCTGATGTGTATGCTTACAACACTCTAATATTAGCTCTTTGTAGAGTTGGG
AATTTCAAGAAAGCCAAGTTTTTGTTGGAGCAAATGGAGTTGCCGGGTTTTAGGTGCCCA
CCTGATGTGTTTACTTACACAATCTTGATTAGCTCTTATTGTAGGTATGGGTTGGAAACT
GGCTGTAGAAAAGCTATTAGGAGGAGGATATGGGAAGCGAATCACTTGTTTCGCCTTATG
TTATTCAAAGGCTTTGTTCCAGATGTTGTAACTTATAATAGTTTGATCAATGGATGCTGC
AAAACTAATAGGATAGAAAGGGCATTGGAGTTATTGGATGATATGGTGAAAAGGGGTATT
GCACCTAATCGAATTACGTATAATTCTTTCATTAGGTACTATAGTGCTACTAATGAGATT
GATAAGGCTATTGAAATGCTGATAAGAATGCAAGGAATGAATCATGCAGTAGTAGCATGT
AACAGTTCCTATACACCGATAATTCATGCCCTTTGTGAAGTTGGTAGACTGGTGGAGGCG
AGAGATTTTCTTGTGGAATTGGCTGAACAAGGTTCAATTCCTAGAGAATATACTTATAAG
CTAGTTCGTGATGCTTTAGAATCTGCTGGGAAGATTGATTTACTTGATGCAGAATTTTGT
AGGCGATTAGAAGATGGTATCAAAGGTAGGATTAGACAAGTGATGAAAATGAAACCTTTG
TTGCAGCATGAAAGTATTTCTTAG

Peptide Sequence

PEP ID

XP_016434265.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g77405-like [Nicotiana tabacum]
Sequence

MFSSRSLSSPNFTQNLLINQVLAAIIRNRNRPFETNVAASIPKQPIWTVEAVSQVLRSIP
RYLFQSPRSIGRQSGFRHRTPLKQRNLREEFHKARKGVLILGPTAHRDPQNVQLGVDKAL
EFFHWVETHCGFTHNELTCKEMSLVLAKGGCKLKLIWEFLKQMSRKGLVTTPTVTCLIKC
LGEEGLVEEALATFYRMKRFHCKPDVYAYNTLILALCRVGNFKKAKFLLEQMELPGFRCP
PDVFTYTILISSYCRYGLETGCRKAIRRRIWEANHLFRLMLFKGFVPDVVTYNSLINGCC
KTNRIERALELLDDMVKRGIAPNRITYNSFIRYYSATNEIDKAIEMLIRMQGMNHAVVAC
NSSYTPIIHALCEVGRLVEARDFLVELAEQGSIPREYTYKLVRDALESAGKIDLLDAEFC
RRLEDGIKGRIRQVMKMKPLLQHESIS

Transcript Sequence

Gene sequence data has not been registered.